3D structure

PDB id
4V85 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
UAGAAU*GGAAUACCGGUGG*CGG
Length
22 nucleotides
Bulged bases
4V85|1|AA|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V85|1|AA|U|672
4V85|1|AA|A|673
4V85|1|AA|G|674
4V85|1|AA|A|675
4V85|1|AA|A|676
4V85|1|AA|U|677
*
4V85|1|AA|G|713
4V85|1|AA|G|714
4V85|1|AA|A|715
4V85|1|AA|A|716
4V85|1|AA|U|717
4V85|1|AA|A|718
4V85|1|AA|C|719
4V85|1|AA|C|720
4V85|1|AA|G|721
4V85|1|AA|G|722
4V85|1|AA|U|723
4V85|1|AA|G|724
4V85|1|AA|G|725
*
4V85|1|AA|C|732
4V85|1|AA|G|733
4V85|1|AA|G|734

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AF
30S ribosomal protein S6 1
Chain AK
30S ribosomal protein S11
Chain AO
30S ribosomal protein S15 1
Chain AR
30S ribosomal protein S18
Chain AU
30S ribosomal protein S21
Chain BC
50S ribosomal protein L2

Coloring options:

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