J3_4V88_058
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AGAUAAAAAAUCAAUG*CUCUUUG*CAU
- Length
- 26 nucleotides
- Bulged bases
- 4V88|1|A2|A|217, 4V88|1|A2|U|240
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V88|1|A2|A|213
4V88|1|A2|G|214
4V88|1|A2|A|215
4V88|1|A2|U|216
4V88|1|A2|A|217
4V88|1|A2|A|218
4V88|1|A2|A|219
4V88|1|A2|A|220
4V88|1|A2|A|221
4V88|1|A2|A|222
4V88|1|A2|U|223
4V88|1|A2|C|224
4V88|1|A2|A|225
4V88|1|A2|A|226
4V88|1|A2|U|227
4V88|1|A2|G|228
*
4V88|1|A2|C|237
4V88|1|A2|U|238
4V88|1|A2|C|239
4V88|1|A2|U|240
4V88|1|A2|U|241
4V88|1|A2|U|242
4V88|1|A2|G|243
*
4V88|1|A2|C|250
4V88|1|A2|A|251
4V88|1|A2|U|252
Current chains
- Chain A2
- 18S RIBOSOMAL RNA
Nearby chains
- Chain AE
- 40S ribosomal protein S4-A
- Chain AG
- 40S ribosomal protein S6-A
- Chain AI
- 40S ribosomal protein S8-A
- Chain AL
- 40S ribosomal protein S11-A
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