3D structure

PDB id
4V89 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
UAGAAU*GGAAUACCGGUGG*CGG
Length
22 nucleotides
Bulged bases
4V89|1|AA|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V89|1|AA|U|672
4V89|1|AA|A|673
4V89|1|AA|G|674
4V89|1|AA|A|675
4V89|1|AA|A|676
4V89|1|AA|U|677
*
4V89|1|AA|G|713
4V89|1|AA|G|714
4V89|1|AA|A|715
4V89|1|AA|A|716
4V89|1|AA|U|717
4V89|1|AA|A|718
4V89|1|AA|C|719
4V89|1|AA|C|720
4V89|1|AA|G|721
4V89|1|AA|G|722
4V89|1|AA|U|723
4V89|1|AA|G|724
4V89|1|AA|G|725
*
4V89|1|AA|C|732
4V89|1|AA|G|733
4V89|1|AA|G|734

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AF
30S ribosomal protein S6
Chain AK
30S ribosomal protein S11
Chain AO
30S ribosomal protein S15
Chain AR
30S ribosomal protein S18
Chain AU
30S ribosomal protein S21
Chain BC
50S ribosomal protein L2

Coloring options:

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