J3_4V89_025

3D structure

PDB id

4V89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GCACAAG*CUAGUAA*UGAAUACGUUCCC

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V89|1|AA|G|933
4V89|1|AA|C|934
4V89|1|AA|A|935
4V89|1|AA|C|936
4V89|1|AA|A|937
4V89|1|AA|A|938
4V89|1|AA|G|939
*
4V89|1|AA|C|1344
4V89|1|AA|U|1345
4V89|1|AA|A|1346
4V89|1|AA|G|1347
4V89|1|AA|U|1348
4V89|1|AA|A|1349
4V89|1|AA|A|1350
*
4V89|1|AA|U|1372
4V89|1|AA|G|1373
4V89|1|AA|A|1374
4V89|1|AA|A|1375
4V89|1|AA|U|1376
4V89|1|AA|A|1377
4V89|1|AA|C|1378
4V89|1|AA|G|1379
4V89|1|AA|U|1380
4V89|1|AA|U|1381
4V89|1|AA|C|1382
4V89|1|AA|C|1383
4V89|1|AA|C|1384

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9