J3_4V8G_006

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAAUG*CCCAGUUC*GCCG

Length

17 nucleotides

Bulged bases

4V8G|1|AA|U|1240, 4V8G|1|AA|U|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8G|1|AA|C|1237
4V8G|1|AA|A|1238
4V8G|1|AA|A|1239
4V8G|1|AA|U|1240
4V8G|1|AA|G|1241
*
4V8G|1|AA|C|1296
4V8G|1|AA|C|1297
4V8G|1|AA|C|1298
4V8G|1|AA|A|1299
4V8G|1|AA|G|1300
4V8G|1|AA|U|1301
4V8G|1|AA|U|1302
4V8G|1|AA|C|1303
*
4V8G|1|AA|G|1334
4V8G|1|AA|C|1335
4V8G|1|AA|C|1336
4V8G|1|AA|G|1337

Current chains

Chain AA

16S Ribosomal RNA

Nearby chains

Chain AG

30S Ribosomal Protein S7

Chain AM

30S Ribosomal Protein S13

Chain AU

30S Ribosomal Protein THX