J3_4V8O_022

3D structure

PDB id

4V8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GCACAAG*CUAGUAA*UGAAUACGUUCCC

Length

27 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8O|1|AA|G|933
4V8O|1|AA|C|934
4V8O|1|AA|A|935
4V8O|1|AA|C|936
4V8O|1|AA|A|937
4V8O|1|AA|A|938
4V8O|1|AA|G|939
*
4V8O|1|AA|C|1344
4V8O|1|AA|U|1345
4V8O|1|AA|A|1346
4V8O|1|AA|G|1347
4V8O|1|AA|U|1348
4V8O|1|AA|A|1349
4V8O|1|AA|A|1350
*
4V8O|1|AA|U|1372
4V8O|1|AA|G|1373
4V8O|1|AA|A|1374
4V8O|1|AA|A|1375
4V8O|1|AA|U|1376
4V8O|1|AA|A|1377
4V8O|1|AA|C|1378
4V8O|1|AA|G|1379
4V8O|1|AA|U|1380
4V8O|1|AA|U|1381
4V8O|1|AA|C|1382
4V8O|1|AA|C|1383
4V8O|1|AA|C|1384

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AG

30S RIBOSOMAL PROTEIN S7

Chain AI

30S RIBOSOMAL PROTEIN S9

Chain AV

Transfer RNA; tRNA

Chain AX

MRNA 5'-R(*AP*AP*AP*AP*AP*AP*UP*GP*UP)-3'