J3_4V92_004

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACUA*UUACG*CAAAGU

Length

15 nucleotides

Bulged bases

4V92|1|A2|A|1093

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|A|1036
4V92|1|A2|C|1037
4V92|1|A2|U|1038
4V92|1|A2|A|1039
*
4V92|1|A2|U|1079
4V92|1|A2|U|1080
4V92|1|A2|A|1081
4V92|1|A2|C|1082
4V92|1|A2|G|1083
*
4V92|1|A2|C|1090
4V92|1|A2|A|1091
4V92|1|A2|A|1092
4V92|1|A2|A|1093
4V92|1|A2|G|1094
4V92|1|A2|U|1095

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BC

US5

Chain BV

ES21

Chain BW

US8

Chain BX

US12

Chain Ba

ES26