J3_4V92_007

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGG*UUGUC*GAUAAC

Length

15 nucleotides

Bulged bases

4V92|1|A2|A|1321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|G|1292
4V92|1|A2|U|1293
4V92|1|A2|G|1294
4V92|1|A2|G|1295
*
4V92|1|A2|U|1302
4V92|1|A2|U|1303
4V92|1|A2|G|1304
4V92|1|A2|U|1305
4V92|1|A2|C|1306
*
4V92|1|A2|G|1318
4V92|1|A2|A|1319
4V92|1|A2|U|1320
4V92|1|A2|A|1321
4V92|1|A2|A|1322
4V92|1|A2|C|1323

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BA

US2

Chain BC

US5

Chain BD

US3

Chain BR

ES17