J3_4V92_008

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAC*GGACUAU*AUGGAAUUU

Length

19 nucleotides

Bulged bases

4V92|1|A2|U|1390, 4V92|1|A2|U|1413, 4V92|1|A2|U|1414

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|A|1336
4V92|1|A2|A|1337
4V92|1|A2|C|1338
*
4V92|1|A2|G|1386
4V92|1|A2|G|1387
4V92|1|A2|A|1388
4V92|1|A2|C|1389
4V92|1|A2|U|1390
4V92|1|A2|A|1391
4V92|1|A2|U|1392
*
4V92|1|A2|A|1406
4V92|1|A2|U|1407
4V92|1|A2|G|1408
4V92|1|A2|G|1409
4V92|1|A2|A|1410
4V92|1|A2|A|1411
4V92|1|A2|U|1413
4V92|1|A2|U|1414
4V92|1|A2|U|1415

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BF

US7

Chain BQ

US9

Chain BR

ES17

Chain BU

US10

Chain Bd

US14

Chain Bg

RACK1