J3_4V92_010

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UAGAUAAAAAAUCAAUGU*ACUCUUUG*CAUA

Length

30 nucleotides

Bulged bases

4V92|1|A2|A|217, 4V92|1|A2|U|227

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|U|212
4V92|1|A2|A|213
4V92|1|A2|G|214
4V92|1|A2|A|215
4V92|1|A2|U|216
4V92|1|A2|A|217
4V92|1|A2|A|218
4V92|1|A2|A|219
4V92|1|A2|A|220
4V92|1|A2|A|221
4V92|1|A2|A|222
4V92|1|A2|U|223
4V92|1|A2|C|224
4V92|1|A2|A|225
4V92|1|A2|A|226
4V92|1|A2|U|227
4V92|1|A2|G|228
4V92|1|A2|U|229
*
4V92|1|A2|A|236
4V92|1|A2|C|237
4V92|1|A2|U|238
4V92|1|A2|C|239
4V92|1|A2|U|240
4V92|1|A2|U|241
4V92|1|A2|U|242
4V92|1|A2|G|243
*
4V92|1|A2|C|250
4V92|1|A2|A|251
4V92|1|A2|U|252
4V92|1|A2|A|253

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BE

ES4

Chain BG

ES6

Chain BI

ES8