J3_4V92_014

3D structure

PDB id

4V92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACCACCAG*CUAGUAAGC*GUUGAUUACGUCCCU

Length

32 nucleotides

Bulged bases

4V92|1|A2|C|1159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V92|1|A2|A|1157
4V92|1|A2|C|1158
4V92|1|A2|C|1159
4V92|1|A2|A|1160
4V92|1|A2|C|1161
4V92|1|A2|C|1162
4V92|1|A2|A|1163
4V92|1|A2|G|1164
*
4V92|1|A2|C|1581
4V92|1|A2|U|1582
4V92|1|A2|A|1583
4V92|1|A2|G|1584
4V92|1|A2|U|1585
4V92|1|A2|A|1586
4V92|1|A2|A|1587
4V92|1|A2|G|1588
4V92|1|A2|C|1589
*
4V92|1|A2|G|1607
4V92|1|A2|U|1608
4V92|1|A2|U|1609
4V92|1|A2|G|1610
4V92|1|A2|A|1611
4V92|1|A2|U|1612
4V92|1|A2|U|1613
4V92|1|A2|A|1614
4V92|1|A2|C|1615
4V92|1|A2|G|1616
4V92|1|A2|U|1617
4V92|1|A2|C|1618
4V92|1|A2|C|1619
4V92|1|A2|C|1620
4V92|1|A2|U|1621

Current chains

Chain A2

18S RRNA

Nearby chains

Chain BF

US7

Chain BQ

US9

Chain BT

ES19

Chain BU

US10

Chain Bc

ES28