3D structure

PDB id
4V97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the bacterial ribosome ram mutation G299A.
Experimental method
X-RAY DIFFRACTION
Resolution
3.52 Å

Loop

Sequence
CCAUAG*CGC*GUCG
Length
13 nucleotides
Bulged bases
4V97|1|DB|C|109
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V97|1|DB|C|11
4V97|1|DB|C|12
4V97|1|DB|A|13
4V97|1|DB|U|14
4V97|1|DB|A|15
4V97|1|DB|G|16
*
4V97|1|DB|C|68
4V97|1|DB|G|69
4V97|1|DB|C|70
*
4V97|1|DB|G|107
4V97|1|DB|U|108
4V97|1|DB|C|109
4V97|1|DB|G|110

Current chains

Chain DB
5S rRNA

Nearby chains

Chain D0
50S RIBOSOMAL PROTEIN L27
Chain DA
Large subunit ribosomal RNA; LSU rRNA
Chain DS
50S RIBOSOMAL PROTEIN L18
Chain DZ
50S RIBOSOMAL PROTEIN L25

Coloring options:

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