J3_4V9B_003
3D structure
- PDB id
- 4V9B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 70S ribosome with tigecycline.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUUAAUUC*GAAGAACCUUAC*GGCGAC
- Length
- 27 nucleotides
- Bulged bases
- 4V9B|1|AA|A|975, 4V9B|1|AA|G|976, 4V9B|1|AA|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V9B|1|AA|G|954
4V9B|1|AA|U|955
4V9B|1|AA|U|956
4V9B|1|AA|U|957
4V9B|1|AA|A|958
4V9B|1|AA|A|959
4V9B|1|AA|U|960
4V9B|1|AA|U|961
4V9B|1|AA|C|962
*
4V9B|1|AA|G|973
4V9B|1|AA|A|974
4V9B|1|AA|A|975
4V9B|1|AA|G|976
4V9B|1|AA|A|977
4V9B|1|AA|A|978
4V9B|1|AA|C|979
4V9B|1|AA|C|980
4V9B|1|AA|U|981
4V9B|1|AA|U|982
4V9B|1|AA|A|983
4V9B|1|AA|C|984
*
4V9B|1|AA|G|1221
4V9B|1|AA|G|1222
4V9B|1|AA|C|1223
4V9B|1|AA|G|1224
4V9B|1|AA|A|1225
4V9B|1|AA|C|1226
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AM
- 30S RIBOSOMAL PROTEIN S10
- Chain AP
- 30S RIBOSOMAL PROTEIN S13
- Chain AQ
- 30S RIBOSOMAL PROTEIN S14
- Chain AV
- 30S RIBOSOMAL PROTEIN S19
Coloring options: