J3_4V9B_011

3D structure

PDB id

4V9B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of the 70S ribosome with tigecycline.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAUG*CAUUUAAAG*CAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9B|1|BA|G|1055
4V9B|1|BA|G|1056
4V9B|1|BA|A|1057
4V9B|1|BA|U|1058
4V9B|1|BA|G|1059
*
4V9B|1|BA|C|1079
4V9B|1|BA|A|1080
4V9B|1|BA|U|1081
4V9B|1|BA|U|1082
4V9B|1|BA|U|1083
4V9B|1|BA|A|1084
4V9B|1|BA|A|1085
4V9B|1|BA|A|1086
4V9B|1|BA|G|1087
*
4V9B|1|BA|C|1102
4V9B|1|BA|A|1103
4V9B|1|BA|C|1104

Current chains

Chain BA

23S ribosomal RNA

Nearby chains