J3_4V9D_021

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAUG*CAUUUAAAG*CAC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9D|1|CA|G|1055
4V9D|1|CA|G|1056
4V9D|1|CA|A|1057
4V9D|1|CA|U|1058
4V9D|1|CA|G|1059
*
4V9D|1|CA|C|1079
4V9D|1|CA|A|1080
4V9D|1|CA|U|1081
4V9D|1|CA|U|1082
4V9D|1|CA|U|1083
4V9D|1|CA|A|1084
4V9D|1|CA|A|1085
4V9D|1|CA|A|1086
4V9D|1|CA|G|1087
*
4V9D|1|CA|C|1102
4V9D|1|CA|A|1103
4V9D|1|CA|C|1104

Current chains

Chain CA

23S rRNA

Nearby chains

Chain C4

50S ribosomal protein L36

Chain CI

50S ribosomal protein L11