J3_4V9D_044

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGGAG*CUAC*GGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9D|1|AA|U|943
4V9D|1|AA|G|944
4V9D|1|AA|G|945
4V9D|1|AA|A|946
4V9D|1|AA|G|947
*
4V9D|1|AA|C|1234
4V9D|1|AA|U|1235
4V9D|1|AA|A|1236
4V9D|1|AA|C|1237
*
4V9D|1|AA|G|1337
4V9D|1|AA|G|1338
4V9D|1|AA|A|1339
4V9D|1|AA|A|1340

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AM

30S ribosomal protein S13

Chain AV

Transfer RNA; tRNA