J3_4V9D_045

3D structure

PDB id

4V9D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUUAAUUC*GAAGAACCUUAC*GGCUAC

Length

27 nucleotides

Bulged bases

4V9D|1|AA|A|975, 4V9D|1|AA|G|976

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9D|1|AA|G|954
4V9D|1|AA|U|955
4V9D|1|AA|U|956
4V9D|1|AA|U|957
4V9D|1|AA|A|958
4V9D|1|AA|A|959
4V9D|1|AA|U|960
4V9D|1|AA|U|961
4V9D|1|AA|C|962
*
4V9D|1|AA|G|973
4V9D|1|AA|A|974
4V9D|1|AA|A|975
4V9D|1|AA|G|976
4V9D|1|AA|A|977
4V9D|1|AA|A|978
4V9D|1|AA|C|979
4V9D|1|AA|C|980
4V9D|1|AA|U|981
4V9D|1|AA|U|982
4V9D|1|AA|A|983
4V9D|1|AA|C|984
*
4V9D|1|AA|G|1221
4V9D|1|AA|G|1222
4V9D|1|AA|C|1223
4V9D|1|AA|U|1224
4V9D|1|AA|A|1225
4V9D|1|AA|C|1226

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AJ

30S ribosomal protein S10

Chain AM

30S ribosomal protein S13

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19