J3_4V9O_065

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

4V9O|1|GA|U|2334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9O|1|GA|C|2295
4V9O|1|GA|U|2296
4V9O|1|GA|A|2297
4V9O|1|GA|A|2298
4V9O|1|GA|U|2299
*
4V9O|1|GA|A|2317
4V9O|1|GA|G|2318
4V9O|1|GA|G|2319
4V9O|1|GA|U|2320
4V9O|1|GA|U|2321
4V9O|1|GA|A|2322
4V9O|1|GA|G|2323
*
4V9O|1|GA|C|2332
4V9O|1|GA|A|2333
4V9O|1|GA|U|2334
4V9O|1|GA|A|2335
4V9O|1|GA|A|2336
4V9O|1|GA|G|2337

Current chains

Chain GA

23S rRNA

Nearby chains

Chain GB

5S ribosomal RNA; 5S rRNA

Chain GF

50S ribosomal protein L5

Chain GO

50S ribosomal protein L18

Chain GW

50S ribosomal protein L27