J3_4V9O_126

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

4V9O|1|FA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4V9O_126 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1259

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

4V9O|1|FA|C|990
4V9O|1|FA|U|991
4V9O|1|FA|U|992
4V9O|1|FA|G|993
4V9O|1|FA|A|994
4V9O|1|FA|C|995
4V9O|1|FA|A|996
4V9O|1|FA|U|997
*
4V9O|1|FA|A|1044
4V9O|1|FA|C|1045
4V9O|1|FA|A|1046
4V9O|1|FA|G|1047
*
4V9O|1|FA|C|1210
4V9O|1|FA|U|1211
4V9O|1|FA|U|1212
4V9O|1|FA|A|1213
4V9O|1|FA|C|1214
4V9O|1|FA|G|1215

Current chains

Chain FA

16S rRNA

Nearby chains

Chain FN

30S ribosomal protein S14