J3_4V9O_139

3D structure

PDB id

4V9O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCCGUAGCG*UAGCGC*GGAAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9O|1|GB|G|10
4V9O|1|GB|C|11
4V9O|1|GB|C|12
4V9O|1|GB|G|13
4V9O|1|GB|U|14
4V9O|1|GB|A|15
4V9O|1|GB|G|16
4V9O|1|GB|C|17
4V9O|1|GB|G|18
*
4V9O|1|GB|U|65
4V9O|1|GB|A|66
4V9O|1|GB|G|67
4V9O|1|GB|C|68
4V9O|1|GB|G|69
4V9O|1|GB|C|70
*
4V9O|1|GB|G|106
4V9O|1|GB|G|107
4V9O|1|GB|A|108
4V9O|1|GB|A|109
4V9O|1|GB|C|110

Current chains

Chain GB

5S rRNA

Nearby chains

Chain GA

Large subunit ribosomal RNA; LSU rRNA

Chain GO

50S ribosomal protein L18

Chain GW

50S ribosomal protein L27