J3_4V9P_144

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAAUG*CGUAGUCCGGAUU*AUGAAGUCG

Length

27 nucleotides

Bulged bases

4V9P|1|HA|U|1240, 4V9P|1|HA|C|1302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9P|1|HA|C|1237
4V9P|1|HA|A|1238
4V9P|1|HA|A|1239
4V9P|1|HA|U|1240
4V9P|1|HA|G|1241
*
4V9P|1|HA|C|1296
4V9P|1|HA|G|1297
4V9P|1|HA|U|1298
4V9P|1|HA|A|1299
4V9P|1|HA|G|1300
4V9P|1|HA|U|1301
4V9P|1|HA|C|1302
4V9P|1|HA|C|1303
4V9P|1|HA|G|1304
4V9P|1|HA|G|1305
4V9P|1|HA|A|1306
4V9P|1|HA|U|1307
4V9P|1|HA|U|1308
*
4V9P|1|HA|A|1329
4V9P|1|HA|U|1330
4V9P|1|HA|G|1331
4V9P|1|HA|A|1332
4V9P|1|HA|A|1333
4V9P|1|HA|G|1334
4V9P|1|HA|U|1335
4V9P|1|HA|C|1336
4V9P|1|HA|G|1337

Current chains

Chain HA

16S rRNA

Nearby chains

Chain CA

Large subunit ribosomal RNA; LSU rRNA

Chain HG

30S ribosomal protein S7

Chain HM

30S ribosomal protein S13