J3_4V9Q_014

3D structure

PDB id

4V9Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GAACC*GGGUGC*GAGC

Length

15 nucleotides

Bulged bases

4V9Q|1|BA|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9Q|1|BA|G|1003
4V9Q|1|BA|A|1004
4V9Q|1|BA|A|1005
4V9Q|1|BA|C|1006
4V9Q|1|BA|C|1007
*
4V9Q|1|BA|G|1022
4V9Q|1|BA|G|1023
4V9Q|1|BA|G|1024
4V9Q|1|BA|U|1025
4V9Q|1|BA|G|1026
4V9Q|1|BA|C|1027
*
4V9Q|1|BA|G|1034
4V9Q|1|BA|A|1035
4V9Q|1|BA|G|1036
4V9Q|1|BA|C|1037

Current chains

Chain BA

16S ribosomal RNA

Nearby chains

Chain CA

Large subunit ribosomal RNA; LSU rRNA