J3_4V9Q_051
3D structure
- PDB id
- 4V9Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GGUGGA*UAC*GGAAUC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V9Q|1|BA|G|941
4V9Q|1|BA|G|942
4V9Q|1|BA|U|943
4V9Q|1|BA|G|944
4V9Q|1|BA|G|945
4V9Q|1|BA|A|946
*
4V9Q|1|BA|U|1235
4V9Q|1|BA|A|1236
4V9Q|1|BA|C|1237
*
4V9Q|1|BA|G|1337
4V9Q|1|BA|G|1338
4V9Q|1|BA|A|1339
4V9Q|1|BA|A|1340
4V9Q|1|BA|U|1341
4V9Q|1|BA|C|1342
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BG
- 30S ribosomal protein S7
- Chain BI
- 30S ribosomal protein S9
- Chain BM
- 30S ribosomal protein S13
- Chain BU
- 30S ribosomal protein Thx
- Chain BV
- Transfer RNA; tRNA
- Chain BW
- Transfer RNA; tRNA
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