J3_4V9S_022

3D structure

PDB id

4V9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antibiotic GE82832 bound to 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CCUUG*CAG*CUUACGG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V9S|1|CA|C|989
4V9S|1|CA|C|990
4V9S|1|CA|U|991
4V9S|1|CA|U|992
4V9S|1|CA|G|993
*
4V9S|1|CA|C|1045
4V9S|1|CA|A|1046
4V9S|1|CA|G|1047
*
4V9S|1|CA|C|1210
4V9S|1|CA|U|1211
4V9S|1|CA|U|1212
4V9S|1|CA|A|1213
4V9S|1|CA|C|1214
4V9S|1|CA|G|1215
4V9S|1|CA|G|1216

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains

Chain CN

30S Ribosomal Protein S14

Chain CS

30S Ribosomal Protein S19