J3_4W23_013
3D structure
- PDB id
- 4W23 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the small ribosomal subunit)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGGCAUGC*GAGGGACAAG*CCCGAGAUUG
- Length
- 29 nucleotides
- Bulged bases
- 4W23|1|2|U|1397
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4W23|1|2|C|1391
4W23|1|2|U|1392
4W23|1|2|G|1393
4W23|1|2|G|1394
4W23|1|2|C|1395
4W23|1|2|A|1396
4W23|1|2|U|1397
4W23|1|2|G|1398
4W23|1|2|C|1399
*
4W23|1|2|G|1447
4W23|1|2|A|1448
4W23|1|2|G|1449
4W23|1|2|G|1450
4W23|1|2|G|1451
4W23|1|2|A|1452
4W23|1|2|C|1453
4W23|1|2|A|1454
4W23|1|2|A|1455
4W23|1|2|G|1456
*
4W23|1|2|C|1470
4W23|1|2|C|1471
4W23|1|2|C|1472
4W23|1|2|G|1473
4W23|1|2|A|1474
4W23|1|2|G|1475
4W23|1|2|A|1476
4W23|1|2|U|1477
4W23|1|2|U|1478
4W23|1|2|G|1479
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain D
- Ribosomal protein uS3
- Chain F
- Ribosomal protein uS7
- Chain Q
- Ribosomal protein uS9
- Chain R
- Ribosomal protein eS17
- Chain U
- Ribosomal protein uS10
- Chain c
- Ribosomal protein eS28
- Chain d
- Ribosomal protein uS14
- Chain g
- Ribosomal protein RACK1
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