J3_4W2E_014
3D structure
- PDB id
- 4W2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCGA
- Length
- 25 nucleotides
- Bulged bases
- 4W2E|1|a|A|975, 4W2E|1|a|G|976, 4W2E|1|a|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4W2E_014 not in the Motif Atlas
- Homologous match to J3_4LFB_004
- Geometric discrepancy: 0.0591
- The information below is about J3_4LFB_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88451.1
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4W2E|1|a|U|955
4W2E|1|a|U|956
4W2E|1|a|U|957
4W2E|1|a|A|958
4W2E|1|a|A|959
4W2E|1|a|U|960
4W2E|1|a|U|961
4W2E|1|a|C|962
*
4W2E|1|a|G|973
4W2E|1|a|A|974
4W2E|1|a|A|975
4W2E|1|a|G|976
4W2E|1|a|A|977
4W2E|1|a|A|978
4W2E|1|a|C|979
4W2E|1|a|C|980
4W2E|1|a|U|981
4W2E|1|a|U|982
4W2E|1|a|A|983
4W2E|1|a|C|984
*
4W2E|1|a|G|1221
4W2E|1|a|G|1222
4W2E|1|a|C|1223
4W2E|1|a|G|1224
4W2E|1|a|A|1225
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain j
- 30S ribosomal protein S10
- Chain m
- 30S ribosomal protein S13
- Chain n
- 30S ribosomal protein S14 type Z
- Chain s
- 30S ribosomal protein S19
Coloring options: