J3_4W2G_032

3D structure

PDB id

4W2G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CGG*CCGGUAAG*CGAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2G|1|DA|C|2789
4W2G|1|DA|G|2792
4W2G|1|DA|G|2793
*
4W2G|1|DA|C|2803
4W2G|1|DA|C|2804
4W2G|1|DA|G|2805
4W2G|1|DA|G|2807
4W2G|1|DA|U|2808
4W2G|1|DA|A|2809
4W2G|1|DA|A|2810
4W2G|1|DA|G|2811
*
4W2G|1|DA|C|2889
4W2G|1|DA|G|2891
4W2G|1|DA|A|2892
4W2G|1|DA|G|2893
4W2G|1|DA|G|2894

Current chains

Chain DA

23S Ribosomal RNA

Nearby chains

Chain DE

50S Ribosomal Protein L3

Chain DW

50S Ribosomal Protein L22