J3_4W4G_035

3D structure

PDB id

4W4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CACG*CGGUAAG*CGAGG

Length

16 nucleotides

Bulged bases

4W4G|1|YA|A|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W4G|1|YA|C|2789
4W4G|1|YA|A|2790
4W4G|1|YA|C|2791
4W4G|1|YA|G|2792
*
4W4G|1|YA|C|2804
4W4G|1|YA|G|2805
4W4G|1|YA|G|2807
4W4G|1|YA|U|2808
4W4G|1|YA|A|2809
4W4G|1|YA|A|2810
4W4G|1|YA|G|2811
*
4W4G|1|YA|C|2889
4W4G|1|YA|G|2891
4W4G|1|YA|A|2892
4W4G|1|YA|G|2893
4W4G|1|YA|G|2894

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YE

50S ribosomal protein L3