J3_4WF9_002

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UGAUCUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

4WF9|1|X|U|731, 4WF9|1|X|G|837, 4WF9|1|X|A|838

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

4WF9|1|X|U|728
4WF9|1|X|G|729
4WF9|1|X|A|730
4WF9|1|X|U|731
4WF9|1|X|C|732
4WF9|1|X|U|733
4WF9|1|X|A|734
*
4WF9|1|X|U|818
4WF9|1|X|A|819
4WF9|1|X|G|820
*
4WF9|1|X|C|836
4WF9|1|X|G|837
4WF9|1|X|A|838
4WF9|1|X|A|839

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain A

50S ribosomal protein L2