J3_4WF9_005

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CUAAG*CGCAAAC*GUAG

Length

16 nucleotides

Bulged bases

4WF9|1|X|A|1653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_68164.1

Basepair signature

cWW-tSH-F-F-tHW-F-F-cWW-cWW-F

Number of instances in this motif group

1

Unit IDs

4WF9|1|X|C|1342
4WF9|1|X|U|1343
4WF9|1|X|A|1344
4WF9|1|X|A|1345
4WF9|1|X|G|1346
*
4WF9|1|X|C|1649
4WF9|1|X|G|1650
4WF9|1|X|C|1651
4WF9|1|X|A|1652
4WF9|1|X|A|1653
4WF9|1|X|A|1654
4WF9|1|X|C|1655
*
4WF9|1|X|G|1664
4WF9|1|X|U|1665
4WF9|1|X|A|1666
4WF9|1|X|G|1667

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34