J3_4WF9_011
3D structure
- PDB id
- 4WF9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.43 Å
Loop
- Sequence
- GC*GUGAAAAGCAC*GAGUGAAAUAGAACC
- Length
- 28 nucleotides
- Bulged bases
- 4WF9|1|X|U|549, 4WF9|1|X|A|553
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_92134.2
- Basepair signature
- cWW-cWW-cWW-F-tWH-cSS-tSS-tSH-tSH-tWW-tHH-tWH-tWW-F-F-cSS-cSW-F-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
4WF9|1|X|G|30
4WF9|1|X|C|31
*
4WF9|1|X|G|520
4WF9|1|X|U|521
4WF9|1|X|G|522
4WF9|1|X|A|523
4WF9|1|X|A|524
4WF9|1|X|A|525
4WF9|1|X|A|526
4WF9|1|X|G|527
4WF9|1|X|C|528
4WF9|1|X|A|529
4WF9|1|X|C|530
*
4WF9|1|X|G|541
4WF9|1|X|A|542
4WF9|1|X|G|543
4WF9|1|X|U|544
4WF9|1|X|G|545
4WF9|1|X|A|546
4WF9|1|X|A|547
4WF9|1|X|A|548
4WF9|1|X|U|549
4WF9|1|X|A|550
4WF9|1|X|G|551
4WF9|1|X|A|552
4WF9|1|X|A|553
4WF9|1|X|C|554
4WF9|1|X|C|555
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain N
- 50S ribosomal protein L20
- Chain P
- 50S ribosomal protein L22
- Chain R
- 50S ribosomal protein L24
Coloring options: