J3_4WF9_015

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CGAAU*AAUCAAAGAA*UGUAG

Length

20 nucleotides

Bulged bases

4WF9|1|X|A|364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.1

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

4WF9|1|X|C|340
4WF9|1|X|G|341
4WF9|1|X|A|342
4WF9|1|X|A|343
4WF9|1|X|U|344
*
4WF9|1|X|A|359
4WF9|1|X|A|360
4WF9|1|X|U|361
4WF9|1|X|C|362
4WF9|1|X|A|363
4WF9|1|X|A|364
4WF9|1|X|A|365
4WF9|1|X|G|366
4WF9|1|X|A|367
4WF9|1|X|A|368
*
4WF9|1|X|U|380
4WF9|1|X|G|381
4WF9|1|X|U|382
4WF9|1|X|A|383
4WF9|1|X|G|384

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L4

Chain R

50S ribosomal protein L24