J3_4WF9_016

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

UCGGGUC*GAUAA*UA

Length

14 nucleotides

Bulged bases

4WF9|1|X|A|1421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_31965.1

Basepair signature

cWW-F-cWW-F-F-F-F-F-cWW

Number of instances in this motif group

5

Unit IDs

4WF9|1|X|U|1381
4WF9|1|X|C|1382
4WF9|1|X|G|1383
4WF9|1|X|G|1384
4WF9|1|X|G|1385
4WF9|1|X|U|1386
4WF9|1|X|C|1387
*
4WF9|1|X|G|1418
4WF9|1|X|A|1419
4WF9|1|X|U|1420
4WF9|1|X|A|1421
4WF9|1|X|A|1422
*
4WF9|1|X|U|1439
4WF9|1|X|A|1440

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain Q

50S ribosomal protein L23