J3_4WF9_020

3D structure

PDB id

4WF9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CA*UAUAAG*CGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_24127.1

Basepair signature

cWW-F-cWW-tWH-F-F-tHS-cWW

Number of instances in this motif group

2

Unit IDs

4WF9|1|X|C|2816
4WF9|1|X|A|2817
*
4WF9|1|X|U|2826
4WF9|1|X|A|2827
4WF9|1|X|U|2828
4WF9|1|X|A|2829
4WF9|1|X|A|2830
4WF9|1|X|G|2831
*
4WF9|1|X|C|2909
4WF9|1|X|G|2910
4WF9|1|X|A|2911
4WF9|1|X|A|2912
4WF9|1|X|G|2913

Current chains

Chain X

23S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain P

50S ribosomal protein L22