J3_4WFA_001
3D structure
- PDB id
- 4WFA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.39 Å
Loop
- Sequence
- ACGUUACUAACG*UGC*GAUUU
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WFA_001 not in the Motif Atlas
- Homologous match to J3_4WF9_001
- Geometric discrepancy: 0.0864
- The information below is about J3_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47707.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-cWW-F-F-cSH-cSH-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
4WFA|1|X|A|56
4WFA|1|X|C|57
4WFA|1|X|G|58
4WFA|1|X|U|59
4WFA|1|X|U|60
4WFA|1|X|A|61
4WFA|1|X|C|62
4WFA|1|X|U|63
4WFA|1|X|A|64
4WFA|1|X|A|65
4WFA|1|X|C|66
4WFA|1|X|G|67
*
4WFA|1|X|U|74
4WFA|1|X|G|75
4WFA|1|X|C|76
*
4WFA|1|X|G|109
4WFA|1|X|A|110
4WFA|1|X|U|111
4WFA|1|X|U|112
4WFA|1|X|U|113
Current chains
- Chain X
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain Q
- 50S ribosomal protein L23
- Chain V
- 50S ribosomal protein L29
Coloring options: