J3_4WFA_002

3D structure

PDB id

4WFA (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

CAAAC*GGGUUGAG*CUG

Length

16 nucleotides

Bulged bases

4WFA|1|X|G|300

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WFA_002 not in the Motif Atlas

Homologous match to J3_4WF9_014

Geometric discrepancy: 0.1088

The information below is about J3_4WF9_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFA|1|X|C|272
4WFA|1|X|A|273
4WFA|1|X|A|274
4WFA|1|X|A|275
4WFA|1|X|C|276
*
4WFA|1|X|G|295
4WFA|1|X|G|296
4WFA|1|X|G|297
4WFA|1|X|U|298
4WFA|1|X|U|299
4WFA|1|X|G|300
4WFA|1|X|A|302
4WFA|1|X|G|303
*
4WFA|1|X|C|414
4WFA|1|X|U|415
4WFA|1|X|G|416

Current chains

Chain X

23S rRNA

Nearby chains