J3_4WFB_001

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CAAAC*GGGUUGUAG*CUG

Length

17 nucleotides

Bulged bases

4WFB|1|X|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WFB_001 not in the Motif Atlas

Homologous match to J3_4WF9_014

Geometric discrepancy: 0.1545

The information below is about J3_4WF9_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFB|1|X|C|272
4WFB|1|X|A|273
4WFB|1|X|A|274
4WFB|1|X|A|275
4WFB|1|X|C|276
*
4WFB|1|X|G|295
4WFB|1|X|G|296
4WFB|1|X|G|297
4WFB|1|X|U|298
4WFB|1|X|U|299
4WFB|1|X|G|300
4WFB|1|X|U|301
4WFB|1|X|A|302
4WFB|1|X|G|303
*
4WFB|1|X|C|414
4WFB|1|X|U|415
4WFB|1|X|G|416

Current chains

Chain X

23S rRNA

Nearby chains