J3_4WFB_009

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CAAC*GUUAUAAG*CGAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFB|1|X|C|2816
4WFB|1|X|A|2817
4WFB|1|X|A|2818
4WFB|1|X|C|2819
*
4WFB|1|X|G|2824
4WFB|1|X|U|2825
4WFB|1|X|U|2826
4WFB|1|X|A|2827
4WFB|1|X|U|2828
4WFB|1|X|A|2829
4WFB|1|X|A|2830
4WFB|1|X|G|2831
*
4WFB|1|X|C|2909
4WFB|1|X|G|2910
4WFB|1|X|A|2911
4WFB|1|X|A|2912
4WFB|1|X|G|2913

Current chains

Chain X

23S rRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain P

50S ribosomal protein L22