J3_4WFB_013
3D structure
- PDB id
- 4WFB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.43 Å
Loop
- Sequence
- AC*GAUAUGC*GAUUU
- Length
- 14 nucleotides
- Bulged bases
- 4WFB|1|X|U|72, 4WFB|1|X|U|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WFB_013 not in the Motif Atlas
- Homologous match to J3_4WF9_013
- Geometric discrepancy: 0.0904
- The information below is about J3_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01004.1
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
4WFB|1|X|A|56
4WFB|1|X|C|57
*
4WFB|1|X|G|70
4WFB|1|X|A|71
4WFB|1|X|U|72
4WFB|1|X|A|73
4WFB|1|X|U|74
4WFB|1|X|G|75
4WFB|1|X|C|76
*
4WFB|1|X|G|109
4WFB|1|X|A|110
4WFB|1|X|U|111
4WFB|1|X|U|112
4WFB|1|X|U|113
Current chains
- Chain X
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain Q
- 50S ribosomal protein L23
- Chain V
- 50S ribosomal protein L29
Coloring options: