J3_4WOI_027
3D structure
- PDB id
- 4WOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 4WOI|1|CA|U|2334
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WOI|1|CA|C|2295
4WOI|1|CA|U|2296
4WOI|1|CA|A|2297
4WOI|1|CA|A|2298
4WOI|1|CA|U|2299
*
4WOI|1|CA|A|2317
4WOI|1|CA|G|2318
4WOI|1|CA|G|2319
4WOI|1|CA|U|2320
4WOI|1|CA|U|2321
4WOI|1|CA|A|2322
4WOI|1|CA|G|2323
*
4WOI|1|CA|C|2332
4WOI|1|CA|A|2333
4WOI|1|CA|U|2334
4WOI|1|CA|A|2335
4WOI|1|CA|A|2336
4WOI|1|CA|G|2337
Current chains
- Chain CA
- 23S ribosomal RNA
Nearby chains
- Chain CB
- 5S ribosomal RNA; 5S rRNA
- Chain CF
- 50S ribosomal protein L5
- Chain CO
- 50S ribosomal protein L18
- Chain CW
- 50S ribosomal protein L27
- Chain DW
- Transfer RNA; tRNA
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