J3_4WOI_044

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAU*AGACUGCC*GGAGGAAGGUG

Length

22 nucleotides

Bulged bases

4WOI|1|AA|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|AA|U|1116
4WOI|1|AA|A|1117
4WOI|1|AA|U|1118
*
4WOI|1|AA|A|1155
4WOI|1|AA|G|1156
4WOI|1|AA|A|1157
4WOI|1|AA|C|1158
4WOI|1|AA|U|1159
4WOI|1|AA|G|1160
4WOI|1|AA|C|1161
4WOI|1|AA|C|1162
*
4WOI|1|AA|G|1174
4WOI|1|AA|G|1175
4WOI|1|AA|A|1176
4WOI|1|AA|G|1177
4WOI|1|AA|G|1178
4WOI|1|AA|A|1179
4WOI|1|AA|A|1180
4WOI|1|AA|G|1181
4WOI|1|AA|G|1182
4WOI|1|AA|U|1183
4WOI|1|AA|G|1184

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AG

30S ribosomal protein S7

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14

Chain DJ

30S ribosomal protein S10