J3_4WOI_069

3D structure

PDB id

4WOI (explore in PDB, NAKB, or RNA 3D Hub)

Description

4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAAGUUUUC*GAGAAUGUGC*GAAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WOI|1|DA|G|1003
4WOI|1|DA|A|1004
4WOI|1|DA|A|1005
4WOI|1|DA|G|1006
4WOI|1|DA|U|1007
4WOI|1|DA|U|1008
4WOI|1|DA|U|1009
4WOI|1|DA|U|1010
4WOI|1|DA|C|1011
*
4WOI|1|DA|G|1018
4WOI|1|DA|A|1019
4WOI|1|DA|G|1020
4WOI|1|DA|A|1021
4WOI|1|DA|A|1022
4WOI|1|DA|U|1023
4WOI|1|DA|G|1024
4WOI|1|DA|U|1025
4WOI|1|DA|G|1026
4WOI|1|DA|C|1027
*
4WOI|1|DA|G|1034
4WOI|1|DA|A|1035
4WOI|1|DA|A|1036
4WOI|1|DA|C|1037

Current chains

Chain DA

16S ribosomal RNA

Nearby chains

Chain DN

30S ribosomal protein S14

Chain DS

30S ribosomal protein S19