J3_4WPO_015

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAAC*GGUGCC*GGAGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WPO_015 not in the Motif Atlas

Homologous match to J3_6CZR_022

Geometric discrepancy: 0.3113

The information below is about J3_6CZR_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WPO|1|BA|G|1002
4WPO|1|BA|G|1003
4WPO|1|BA|A|1004
4WPO|1|BA|A|1005
4WPO|1|BA|C|1006
*
4WPO|1|BA|G|1023
4WPO|1|BA|G|1024
4WPO|1|BA|U|1025
4WPO|1|BA|G|1026
4WPO|1|BA|C|1027
4WPO|1|BA|C|1028
*
4WPO|1|BA|G|1033
4WPO|1|BA|G|1034
4WPO|1|BA|A|1035
4WPO|1|BA|G|1036
4WPO|1|BA|C|1037
4WPO|1|BA|C|1038

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains