J3_4WPO_021

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAGG*CCUUUAAAGAGUG*CUCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WPO|1|CA|G|1055
4WPO|1|CA|G|1056
4WPO|1|CA|A|1057
4WPO|1|CA|G|1058
4WPO|1|CA|G|1059
*
4WPO|1|CA|C|1079
4WPO|1|CA|C|1080
4WPO|1|CA|U|1081
4WPO|1|CA|U|1082
4WPO|1|CA|U|1083
4WPO|1|CA|A|1084
4WPO|1|CA|A|1085
4WPO|1|CA|A|1086
4WPO|1|CA|G|1087
4WPO|1|CA|A|1088
4WPO|1|CA|G|1089
4WPO|1|CA|U|1090
4WPO|1|CA|G|1091
*
4WPO|1|CA|C|1100
4WPO|1|CA|U|1101
4WPO|1|CA|C|1102
4WPO|1|CA|A|1103
4WPO|1|CA|C|1104

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C9

50S ribosomal protein L36

Chain CK

50S ribosomal protein L10

Chain CL

50S ribosomal protein L11