J3_4WQ1_023

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAC*GGUGCC*GGAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQ1|1|1G|G|1003
4WQ1|1|1G|A|1004
4WQ1|1|1G|A|1005
4WQ1|1|1G|C|1006
*
4WQ1|1|1G|G|1023
4WQ1|1|1G|G|1024
4WQ1|1|1G|U|1025
4WQ1|1|1G|G|1026
4WQ1|1|1G|C|1027
4WQ1|1|1G|C|1028
*
4WQ1|1|1G|G|1033
4WQ1|1|1G|G|1034
4WQ1|1|1G|A|1035
4WQ1|1|1G|G|1036
4WQ1|1|1G|C|1037

Current chains

Chain 1G

16S ribosomal RNA

Nearby chains

Chain 22

30S ribosomal protein S3