J3_4WQ1_035

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CACG*CGGUAAG*CGAGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQ1|1|1H|C|2789
4WQ1|1|1H|A|2790
4WQ1|1|1H|C|2791
4WQ1|1|1H|G|2792
*
4WQ1|1|1H|C|2804
4WQ1|1|1H|G|2805
4WQ1|1|1H|G|2807
4WQ1|1|1H|U|2808
4WQ1|1|1H|A|2809
4WQ1|1|1H|A|2810
4WQ1|1|1H|G|2811
*
4WQ1|1|1H|C|2889
4WQ1|1|1H|G|2891
4WQ1|1|1H|A|2892
4WQ1|1|1H|G|2893
4WQ1|1|1H|G|2894

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 21

50S ribosomal protein L3