J3_4WQF_014

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4WQF_014 not in the Motif Atlas

Homologous match to J3_6CZR_021

Geometric discrepancy: 0.2229

The information below is about J3_6CZR_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQF|1|BA|C|990
4WQF|1|BA|U|991
4WQF|1|BA|U|992
4WQF|1|BA|G|993
*
4WQF|1|BA|C|1045
4WQF|1|BA|A|1046
4WQF|1|BA|G|1047
*
4WQF|1|BA|C|1210
4WQF|1|BA|U|1211
4WQF|1|BA|U|1212
4WQF|1|BA|A|1213
4WQF|1|BA|C|1214
4WQF|1|BA|G|1215

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BN

30S ribosomal protein S14 type Z