J3_4WQF_063

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAGGUUG*CAUCCUUUAAAGAGUG*CUCAC

Length

29 nucleotides

Bulged bases

4WQF|1|CA|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQF|1|CA|G|1055
4WQF|1|CA|G|1056
4WQF|1|CA|A|1057
4WQF|1|CA|G|1058
4WQF|1|CA|G|1059
4WQF|1|CA|U|1060
4WQF|1|CA|U|1061
4WQF|1|CA|G|1062
*
4WQF|1|CA|C|1076
4WQF|1|CA|A|1077
4WQF|1|CA|U|1078
4WQF|1|CA|C|1079
4WQF|1|CA|C|1080
4WQF|1|CA|U|1081
4WQF|1|CA|U|1082
4WQF|1|CA|U|1083
4WQF|1|CA|A|1084
4WQF|1|CA|A|1085
4WQF|1|CA|A|1086
4WQF|1|CA|G|1087
4WQF|1|CA|A|1088
4WQF|1|CA|G|1089
4WQF|1|CA|U|1090
4WQF|1|CA|G|1091
*
4WQF|1|CA|C|1100
4WQF|1|CA|U|1101
4WQF|1|CA|C|1102
4WQF|1|CA|A|1103
4WQF|1|CA|C|1104

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C9

50S ribosomal protein L36

Chain CK

50S ribosomal protein L10

Chain CL

50S ribosomal protein L11

Chain CQ

50S ribosomal protein L16

Chain CZ

50S ribosomal protein L25