J3_4WQF_076
3D structure
- PDB id
- 4WQF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCGA
- Length
- 25 nucleotides
- Bulged bases
- 4WQF|1|DA|A|975, 4WQF|1|DA|G|976, 4WQF|1|DA|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4WQF_076 not in the Motif Atlas
- Homologous match to J3_4LFB_004
- Geometric discrepancy: 0.104
- The information below is about J3_4LFB_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88451.1
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4WQF|1|DA|U|955
4WQF|1|DA|U|956
4WQF|1|DA|U|957
4WQF|1|DA|A|958
4WQF|1|DA|A|959
4WQF|1|DA|U|960
4WQF|1|DA|U|961
4WQF|1|DA|C|962
*
4WQF|1|DA|G|973
4WQF|1|DA|A|974
4WQF|1|DA|A|975
4WQF|1|DA|G|976
4WQF|1|DA|A|977
4WQF|1|DA|A|978
4WQF|1|DA|C|979
4WQF|1|DA|C|980
4WQF|1|DA|U|981
4WQF|1|DA|U|982
4WQF|1|DA|A|983
4WQF|1|DA|C|984
*
4WQF|1|DA|G|1221
4WQF|1|DA|G|1222
4WQF|1|DA|C|1223
4WQF|1|DA|G|1224
4WQF|1|DA|A|1225
Current chains
- Chain DA
- 16S Ribosomal RNA
Nearby chains
- Chain DJ
- 30S ribosomal protein S10
- Chain DM
- 30S ribosomal protein S13
- Chain DN
- 30S ribosomal protein S14 type Z
- Chain DS
- 30S ribosomal protein S19
- Chain DZ
- 50S ribosomal protein L9,Elongation factor G
Coloring options: