J3_4WQR_011

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

GGAUG*CAUUUAAAGAGUG*CUCAC

Length

23 nucleotides

Bulged bases

4WQR|1|14|U|1083, 4WQR|1|14|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQR|1|14|G|1055
4WQR|1|14|G|1056
4WQR|1|14|A|1057
4WQR|1|14|U|1058
4WQR|1|14|G|1059
*
4WQR|1|14|C|1079
4WQR|1|14|A|1080
4WQR|1|14|U|1081
4WQR|1|14|U|1082
4WQR|1|14|U|1083
4WQR|1|14|A|1084
4WQR|1|14|A|1085
4WQR|1|14|A|1086
4WQR|1|14|G|1087
4WQR|1|14|A|1088
4WQR|1|14|G|1089
4WQR|1|14|U|1090
4WQR|1|14|G|1091
*
4WQR|1|14|C|1100
4WQR|1|14|U|1101
4WQR|1|14|C|1102
4WQR|1|14|A|1103
4WQR|1|14|C|1104

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 59

50S ribosomal protein L6